Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
nek8NIMA-related kinase 8. (696 aa)    
Predicted Functional Partners:
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 
 0.971
ENSACLP00000011054
Inversin.
    
 
 0.955
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
    
 
 0.930
ENSACLP00000029798
RPGR interacting protein 1.
    
 
 0.858
ENSACLP00000040948
Nephronophthisis 3.
    
 
 0.761
nphp1
Nephronophthisis 1.
    
 
 0.742
ENSACLP00000030893
Centrosomal protein 290.
   
 
 0.727
ENSACLP00000025761
Uncharacterized protein.
      
 0.719
ENSACLP00000025930
Uncharacterized protein.
      
 0.719
rpgrip1l
RPGRIP1 like.
    
 
 0.714
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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