STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113012577Solute carrier family 18 member B1. (499 aa)    
Predicted Functional Partners:
ENSACLP00000008539
Uncharacterized protein.
     
 0.721
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.721
CASK
Uncharacterized protein; Belongs to the MAGUK family.
     
 0.720
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
     
 0.720
slc32a1
Solute carrier family 32 member 1.
     
 0.599
LOC113014024
Aa_trans domain-containing protein.
     
 0.599
ENSACLP00000038471
Aa_trans domain-containing protein.
     
 0.599
ENSACLP00000033311
Si:ch1073-513e17.1.
     
 0.534
slc17a5
Solute carrier family 17 member 5.
     
 0.534
ENSACLP00000004444
Uncharacterized protein.
     
 0.529
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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