Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc21DnaJ heat shock protein family (Hsp40) member C21. (527 aa)    
Predicted Functional Partners:
pa2g4
Proliferation-associated 2G4, b.
   
 
 0.950
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.941
znf622
Zinc finger protein 622.
   
 
 0.882
ENSACLP00000036355
Reticulophagy regulator 1.
   
 
 0.880
ENSACLP00000017730
DnaJ (Hsp40) homolog, subfamily C, member 2.
   
 
 0.852
gsr
Glutathione reductase.
     
  0.849
ENSACLP00000033326
5-oxoprolinase, ATP-hydrolysing.
     
  0.849
retreg3
Reticulophagy regulator family member 3.
   
 
 0.833
ENSACLP00000041430
Reticulophagy regulator family member 2.
   
 
 0.833
LOC113016125
Peroxiredoxin 6.
    
  0.817
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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