STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chaf1bChromatin assembly factor 1, subunit B. (600 aa)    
Predicted Functional Partners:
ENSACLP00000008291
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.975
LOC113020617
Anti-silencing function 1Ba histone chaperone.
   
 
 0.958
ENSACLP00000035523
Anti-silencing function 1Ba histone chaperone.
   
 
 0.958
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.955
LOC113027513
Retinoblastoma binding protein 4, like.
   
 
 0.909
LOC113011815
Retinoblastoma binding protein 4.
   
 
 0.909
LOC113014472
WD_REPEATS_REGION domain-containing protein.
   
 
 0.909
wdr73
WD repeat domain 73.
   
 
 0.905
insig2
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis.
    
 
 0.905
insig1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis.
    
 
 0.905
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.