Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arhgap45Rho GTPase activating protein 45b. (1277 aa)    
Predicted Functional Partners:
ENSACLP00000003526
Ras association and DIL domains.
    
 0.824
ENSACLP00000031001
Si:ch73-281f12.4.
    
 0.824
rasip1
Ras interacting protein 1.
    
 0.824
LOC113027694
Si:ch211-176g6.2.
    
 0.824
LOC113012818
Uncharacterized protein.
    
 0.736
LOC113012962
Uncharacterized protein.
    
 0.736
ENSACLP00000012848
Uncharacterized protein.
    
 0.736
LOC113013171
Uncharacterized protein.
    
 0.736
LOC113022452
Ras homolog gene family, member Ab.
    
 0.736
LOC113022007
Ras homolog family member Cb.
    
 0.736
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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