STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007706Ig-like domain-containing protein. (110 aa)    
Predicted Functional Partners:
ENSACLP00000008493
Uncharacterized protein.
  
 
 
0.480
LOC113028507
Uncharacterized protein.
    
  0.473
cd79b
Ig-like domain-containing protein.
     
  0.472
cd79a
CD79a molecule, immunoglobulin-associated alpha.
     
 0.462
pla2g4a
Phospholipase A2.
     
  0.444
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
  0.426
ntng1
Netrin g1a.
    
  0.426
ENSACLP00000008744
Ig-like domain-containing protein.
  
  
 
0.408
ENSACLP00000008849
Ig-like domain-containing protein.
  
  
 
0.406
ENSACLP00000007333
Ig-like domain-containing protein.
  
  
 
0.404
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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