Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dpy19l1Dpy-19-like 1, like (H. sapiens). (738 aa)    
Predicted Functional Partners:
ENSACLP00000036598
Coiled-coil domain containing 62.
      
 0.720
nt5dc1
5'-nucleotidase domain containing 1.
      
 0.716
ccdc152
Uncharacterized protein.
      
 0.698
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.696
ENSACLP00000021033
TSR2 ribosome maturation factor.
      
 0.676
ccdc125
Coiled-coil domain containing 125.
      
 0.669
LOC113024641
Cytohesin 4b.
      
 0.668
unc5a
Unc-5 netrin receptor A.
    
 
 0.658
tsr1
TSR1 ribosome maturation factor.
      
 0.658
pick1
Protein interacting with prkca 1.
      
 0.654
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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