STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113031064Reticulon 4 receptor-like 1a. (455 aa)    
Predicted Functional Partners:
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
 0.765
ntng1
Netrin g1a.
    
 0.765
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.747
LOC113013952
Uncharacterized protein.
    
   0.746
ENSACLP00000001953
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
    
   0.746
ENSACLP00000003356
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.746
ENSACLP00000003374
Uncharacterized protein.
    
   0.746
ENSACLP00000013942
SUEL-type lectin domain-containing protein.
    
   0.746
ENSACLP00000013964
SUEL-type lectin domain-containing protein.
    
   0.746
ENSACLP00000014129
SUEL-type lectin domain-containing protein.
    
   0.746
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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