STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013757Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a. (403 aa)    
Predicted Functional Partners:
c1galt1c1
C1GALT1-specific chaperone 1.
   
 0.979
nelfe
Negative elongation factor complex member E.
   
 0.962
nelfb
Negative elongation factor complex member B.
   
 0.960
nelfcd
Negative elongation factor complex member C/D.
    
 0.958
LOC113015435
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 0.944
GALNT5
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.939
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.938
ENSACLP00000033103
ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
    
 0.938
LOC113027995
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 0.927
gcnt4
Si:dkeyp-87d8.8.
    
 0.923
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.