Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TPPPTubulin polymerization promoting protein. (237 aa)    
Predicted Functional Partners:
LOC113025649
Uncharacterized protein; Belongs to the synuclein family.
    
 
 0.963
LOC113028240
Gamma-synuclein; Belongs to the synuclein family.
    
 
 0.752
sncg
Gamma-synuclein; Belongs to the synuclein family.
    
 
 0.752
gpnmb
Glycoprotein (transmembrane) nmb.
      
 0.669
dcx
Uncharacterized protein.
      
 0.669
dse
Dermatan sulfate epimerase.
      
 0.633
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 
 0.589
map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
    
 
 0.589
LOC113034547
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.528
dusp13
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.528
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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