LOC113022036 protein (Astatotilapia calliptera)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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textmining

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Score

LOC113022036

Uncharacterized protein. (450 aa)

Predicted Functional Partners:

txndc11

0.877

LOC113013850

0.751

bglap

0.596

LOC113025882

0.585

LOC113015672

0.585

mysm1

0.544

frem1

0.528

ENSACLP00000030575

0.528

ENSACLP00000037094

0.520

ENSACLP00000001877

0.509

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001877	ENSACLP00000030575	ENSACLP00000001877	ENSACLP00000030575	Fraser extracellular matrix complex subunit 1.	Fras1 related extracellular matrix 1b.	0.908
ENSACLP00000001877	LOC113022036	ENSACLP00000001877	ENSACLP00000007759	Fraser extracellular matrix complex subunit 1.	Uncharacterized protein.	0.509
ENSACLP00000001877	bglap	ENSACLP00000001877	ENSACLP00000025412	Fraser extracellular matrix complex subunit 1.	Gla domain-containing protein.	0.437
ENSACLP00000001877	frem1	ENSACLP00000001877	ENSACLP00000011405	Fraser extracellular matrix complex subunit 1.	Fras1 related extracellular matrix 1a.	0.908
ENSACLP00000030575	ENSACLP00000001877	ENSACLP00000030575	ENSACLP00000001877	Fras1 related extracellular matrix 1b.	Fraser extracellular matrix complex subunit 1.	0.908
ENSACLP00000030575	LOC113022036	ENSACLP00000030575	ENSACLP00000007759	Fras1 related extracellular matrix 1b.	Uncharacterized protein.	0.528
ENSACLP00000030575	frem1	ENSACLP00000030575	ENSACLP00000011405	Fras1 related extracellular matrix 1b.	Fras1 related extracellular matrix 1a.	0.873
ENSACLP00000037094	LOC113022036	ENSACLP00000037094	ENSACLP00000007759	Im:7152348.	Uncharacterized protein.	0.520
ENSACLP00000037094	mysm1	ENSACLP00000037094	ENSACLP00000019550	Im:7152348.	Myb-like, SWIRM and MPN domains 1.	0.711
LOC113013850	LOC113015672	ENSACLP00000015922	ENSACLP00000032911	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.982
LOC113013850	LOC113022036	ENSACLP00000015922	ENSACLP00000007759	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.751
LOC113013850	LOC113025882	ENSACLP00000015922	ENSACLP00000031963	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.983
LOC113013850	txndc11	ENSACLP00000015922	ENSACLP00000008258	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Thioredoxin domain containing 11.	0.988
LOC113015672	LOC113013850	ENSACLP00000032911	ENSACLP00000015922	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.982
LOC113015672	LOC113022036	ENSACLP00000032911	ENSACLP00000007759	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.585
LOC113015672	LOC113025882	ENSACLP00000032911	ENSACLP00000031963	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.872
LOC113015672	txndc11	ENSACLP00000032911	ENSACLP00000008258	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Thioredoxin domain containing 11.	0.624
LOC113022036	ENSACLP00000001877	ENSACLP00000007759	ENSACLP00000001877	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.509
LOC113022036	ENSACLP00000030575	ENSACLP00000007759	ENSACLP00000030575	Uncharacterized protein.	Fras1 related extracellular matrix 1b.	0.528
LOC113022036	ENSACLP00000037094	ENSACLP00000007759	ENSACLP00000037094	Uncharacterized protein.	Im:7152348.	0.520