Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
trappc8Trafficking protein particle complex 8. (1475 aa)    
Predicted Functional Partners:
trappc11
Trafficking protein particle complex 11.
   
 0.999
ENSACLP00000012032
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.999
trappc2l
Trafficking protein particle complex 2-like.
    
 0.999
ENSACLP00000003055
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.998
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.997
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.997
trappc10
Trafficking protein particle complex 10.
   
 0.996
TRAPPC9
Trafficking protein particle complex 9.
   
 0.995
trappc13
Trafficking protein particle complex 13.
   
 0.995
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.992
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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