Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113011112Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
LOC113008016
Tissue factor pathway inhibitor.
     
 0.812
LOC113015535
Coagulation factor VII, like.
    
 0.803
LOC113015533
Coagulation factor VII.
    
 0.803
ENSACLP00000006039
Coagulation factor VIIi.
    
 0.803
ENSACLP00000006053
Coagulation factor X.
    
 0.803
LOC113030221
Coagulation factor IXb.
    
 0.803
LOC113036967
Uncharacterized protein.
    
 0.803
ENSACLP00000029672
Coagulation factor IXa.
    
 0.803
LOC113020790
Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.
    
 0.803
LOC113015525
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.777
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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