Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022662Fibromodulin a. (348 aa)    
Predicted Functional Partners:
LOC113036502
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.923
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.905
LOC113011971
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.905
ENSACLP00000011103
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.901
LOC113007307
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.901
LOC113009045
Decorin; May affect the rate of fibrils formation.
  
 
0.884
LOC113022661
Zgc:113307.
   
 
  0.873
fmod
Fibromodulin b.
     
  0.872
ENSACLP00000015666
Fin bud initiation factor a.
   
    0.855
ENSACLP00000017462
Fin bud initiation factor b.
   
    0.855
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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