STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113036168ArfGAP with FG repeats 1a. (634 aa)    
Predicted Functional Partners:
ENSACLP00000012866
Uncharacterized protein.
    
 0.986
ENSACLP00000012873
SH3 domain-containing protein.
    
 0.986
ENSACLP00000014175
Intersectin 2b.
    
 0.986
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.832
ENSACLP00000034552
Epidermal growth factor receptor pathway substrate 15.
    
 0.745
ENSACLP00000015691
Epidermal growth factor receptor pathway substrate 15 like 1.
    
 0.727
eps15l1
Epidermal growth factor receptor pathway substrate 15-like 1a.
    
 0.727
ENSACLP00000000836
Intersectin 1 (SH3 domain protein).
    
 0.716
ENSACLP00000001080
Uncharacterized protein.
    
 0.716
ENSACLP00000012953
EH domain-containing protein.
    
 0.709
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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