STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007897Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
actl6a
Actin-like 6A; Belongs to the actin family.
    
 0.651
LOC113022034
Myosin binding protein Hb.
    
 0.603
LOC113026511
Uncharacterized protein.
    
 0.603
STAC2
SH3 and cysteine rich domain 2.
    
 0.603
LOC113012684
Actin alpha 1, skeletal muscle.
    
 0.603
LOC113024469
Uncharacterized protein.
    
 0.603
ENSACLP00000004406
Uncharacterized protein; Belongs to the actin family.
    
 0.603
LOC113024470
Uncharacterized protein.
    
 0.603
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.603
LOC113034393
Uncharacterized protein.
    
 0.603
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.