STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007899Methyltransferase like 17. (454 aa)    
Predicted Functional Partners:
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.955
mrps35
Mitochondrial ribosomal protein S35.
    
 0.952
mrps16
Mitochondrial ribosomal protein S16.
    
 0.949
dap3
Death associated protein 3.
   
 0.945
mrps10
Mitochondrial ribosomal protein S10.
    
 0.943
ENSACLP00000038160
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.943
LOC113007747
Cytochrome c oxidase copper chaperone COX17.
     
 0.938
ENSACLP00000038524
Mitochondrial ribosomal protein S6.
   
  0.929
mettl15
Methyltransferase like 15.
    
 
 0.927
mrps7
Mitochondrial ribosomal protein S7.
    
 0.927
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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