STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
commd2COMM domain containing 2. (202 aa)    
Predicted Functional Partners:
commd8
COMM domain containing 8.
   
 0.997
LOC113026753
COMM domain containing 4.
   
 0.997
ccdc22
Coiled-coil domain containing 22.
    
 0.996
COMMD10
COMM domain containing 10.
   
 0.996
commd9
COMM domain containing 9.
   
 0.996
commd5
COMM domain containing 5.
    
 0.996
commd3
COMM domain containing 3.
   
 0.996
ENSACLP00000039582
COMM domain containing 6.
   
 0.996
ENSACLP00000021411
Copper metabolism (Murr1) domain containing 1.
    
 0.995
ENSACLP00000009201
Coiled-coil domain containing 93.
    
 
 0.992
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.