STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113033345Serine/threonine-protein phosphatase. (506 aa)    
Predicted Functional Partners:
wdr92
WD repeat domain 92.
    
 0.947
LOC113014930
Nuclear factor of activated T cells 1.
    
 0.936
NFATC1
Nuclear factor of activated T cells 1.
    
 0.936
ENSACLP00000037904
Anaphase promoting complex subunit 1.
    
 0.931
ENSACLP00000003860
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
   
 0.925
ppp3r1
Uncharacterized protein.
   
 0.925
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
  0.906
CALML6
Calmodulin like 6.
    
 0.901
nfatc3
Nuclear factor of activated T cells 3a.
    
 0.889
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.889
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.