ENSACLP00000007915 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000007915

Uncharacterized protein. (1570 aa)

Predicted Functional Partners:

fau

0.776

ENSACLP00000008539

0.698

RIMS2

0.698

frem1

0.661

ENSACLP00000030575

0.661

ENSACLP00000001877

0.654

LOC113007418

0.585

ENSACLP00000012734

0.530

ENSACLP00000007613

0.499

ENSACLP00000022985

0.498

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001877	ENSACLP00000007613	ENSACLP00000001877	ENSACLP00000007613	Fraser extracellular matrix complex subunit 1.	Matrin-type domain-containing protein.	0.491
ENSACLP00000001877	ENSACLP00000007915	ENSACLP00000001877	ENSACLP00000007915	Fraser extracellular matrix complex subunit 1.	Uncharacterized protein.	0.654
ENSACLP00000001877	ENSACLP00000030575	ENSACLP00000001877	ENSACLP00000030575	Fraser extracellular matrix complex subunit 1.	Fras1 related extracellular matrix 1b.	0.908
ENSACLP00000001877	frem1	ENSACLP00000001877	ENSACLP00000011405	Fraser extracellular matrix complex subunit 1.	Fras1 related extracellular matrix 1a.	0.908
ENSACLP00000007613	ENSACLP00000001877	ENSACLP00000007613	ENSACLP00000001877	Matrin-type domain-containing protein.	Fraser extracellular matrix complex subunit 1.	0.491
ENSACLP00000007613	ENSACLP00000007915	ENSACLP00000007613	ENSACLP00000007915	Matrin-type domain-containing protein.	Uncharacterized protein.	0.499
ENSACLP00000007613	ENSACLP00000008539	ENSACLP00000007613	ENSACLP00000008539	Matrin-type domain-containing protein.	Uncharacterized protein.	0.405
ENSACLP00000007613	ENSACLP00000030575	ENSACLP00000007613	ENSACLP00000030575	Matrin-type domain-containing protein.	Fras1 related extracellular matrix 1b.	0.493
ENSACLP00000007613	LOC113007418	ENSACLP00000007613	ENSACLP00000030257	Matrin-type domain-containing protein.	RAN binding protein 2.	0.460
ENSACLP00000007613	RIMS2	ENSACLP00000007613	ENSACLP00000037307	Matrin-type domain-containing protein.	Regulating synaptic membrane exocytosis 2.	0.405
ENSACLP00000007613	frem1	ENSACLP00000007613	ENSACLP00000011405	Matrin-type domain-containing protein.	Fras1 related extracellular matrix 1a.	0.493
ENSACLP00000007915	ENSACLP00000001877	ENSACLP00000007915	ENSACLP00000001877	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.654
ENSACLP00000007915	ENSACLP00000007613	ENSACLP00000007915	ENSACLP00000007613	Uncharacterized protein.	Matrin-type domain-containing protein.	0.499
ENSACLP00000007915	ENSACLP00000008539	ENSACLP00000007915	ENSACLP00000008539	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSACLP00000007915	ENSACLP00000012734	ENSACLP00000007915	ENSACLP00000012734	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.530
ENSACLP00000007915	ENSACLP00000022985	ENSACLP00000007915	ENSACLP00000022985	Uncharacterized protein.	Uncharacterized protein.	0.498
ENSACLP00000007915	ENSACLP00000030575	ENSACLP00000007915	ENSACLP00000030575	Uncharacterized protein.	Fras1 related extracellular matrix 1b.	0.661
ENSACLP00000007915	LOC113007418	ENSACLP00000007915	ENSACLP00000030257	Uncharacterized protein.	RAN binding protein 2.	0.585
ENSACLP00000007915	RIMS2	ENSACLP00000007915	ENSACLP00000037307	Uncharacterized protein.	Regulating synaptic membrane exocytosis 2.	0.698
ENSACLP00000007915	fau	ENSACLP00000007915	ENSACLP00000000490	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.776