STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sh3yl1SH3 and SYLF domain containing 1. (355 aa)    
Predicted Functional Partners:
LOC113008847
Uncharacterized protein.
    
 
 0.906
LOC113026240
WASP like actin nucleation promoting factor a.
    
 
 0.906
mvk
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
    
   0.906
LOC113018881
Uncharacterized protein.
    
 
 0.831
ENSACLP00000035987
WH1 domain-containing protein.
    
 
 0.831
ENSACLP00000038568
SH3 domain containing 19.
   
   0.759
ENSACLP00000039581
Uncharacterized protein.
   
   0.752
LOC113036093
Glutamine-fructose-6-phosphate transaminase 2.
   
    0.653
LOC113034132
Glutamine--fructose-6-phosphate transaminase 1.
   
    0.653
trappc8
Trafficking protein particle complex 8.
    
  0.623
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.