Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113030230Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
LOC113007766
G protein-coupled receptor 39.
      
 0.640
LOC113025499
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.639
yod1
YOD1 deubiquitinase.
      
 0.575
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
      
 0.575
mgll
Monoglyceride lipase.
   
 0.563
klhl29
Kelch-like family member 29.
      
 0.534
LOC113009715
Tetraspanin.
      
 0.521
LOC113036274
TM4SF19-TCTEX1D2 readthrough (NMD candidate).
      
 0.516
tm4sf4
Transmembrane 4 L six family member 4.
      
 0.516
nrarp
NOTCH regulated ankyrin repeat protein a.
     
 0.494
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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