STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007944SET domain-containing protein. (179 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.912
ENSACLP00000008367
SET domain containing 7, histone lysine methyltransferase.
    
 0.910
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.891
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.888
ENSACLP00000029365
Lysine (K)-specific methyltransferase 2E.
    
 0.873
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
     
 0.857
SETD2
SET domain containing 2, histone lysine methyltransferase.
     
 0.849
SMYD3
SET and MYND domain containing 3.
    
 0.842
LOC113022928
SET domain and mariner transposase fusion gene.
     
 0.836
LOC113013265
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
    
  0.833
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.