Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000007949Stabilin 1. (2350 aa)    
Predicted Functional Partners:
gulp1
PID domain-containing protein.
    
 0.885
sparc
Secreted protein, acidic, cysteine-rich (osteonectin).
     
 0.697
ENSACLP00000032100
SPARC-like 2.
     
 0.697
lyve1
Lymphatic vessel endothelial hyaluronic receptor 1a.
   
 
 0.592
ENSACLP00000000212
Murine retrovirus integration site 1 homolog.
   
 
 0.592
ENSACLP00000030959
Link domain-containing protein.
   
 
 0.592
reep3
Receptor expression-enhancing protein.
      
 0.583
tnfrsf13b
TACI-CRD2 domain-containing protein.
    
 0.575
tsnare1
Si:ch211-208k15.1; Belongs to the syntaxin family.
      
 0.549
oit3
Oncoprotein induced transcript 3.
   
 
 0.541
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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