STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000007949Stabilin 1. (2350 aa)    
Predicted Functional Partners:
sparc
Secreted protein, acidic, cysteine-rich (osteonectin).
     
 0.648
ENSACLP00000032100
SPARC-like 2.
     
 0.648
tnfrsf13b
TACI-CRD2 domain-containing protein.
    
 0.625
LOC113007943
Uncharacterized protein.
    
  0.613
ENSACLP00000027284
Uncharacterized protein.
    
  0.613
LOC113007562
Zmp:0000000936.
    
  0.613
ENSACLP00000035615
Uncharacterized protein.
    
  0.611
ENSACLP00000035628
Interleukin-1.
    
  0.611
LOC113006477
CD59 molecule (CD59 blood group).
    
  0.566
LOC113011617
Apolipoprotein Ba.
   
 
 0.563
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.