Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113031698HERPUD family member 2. (412 aa)    
Predicted Functional Partners:
ENSACLP00000032458
Synovial apoptosis inhibitor 1, synoviolin.
   
 
 0.729
amfr
Autocrine motility factor receptor b.
   
 
 0.722
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.613
atf4
Activating transcription factor 4a.
   
 
 0.577
LOC113027453
DnaJ heat shock protein family (Hsp40) member B9a.
   
  
 0.526
dnajb9
DnaJ heat shock protein family (Hsp40) member B9b.
   
  
 0.526
edem1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
 0.518
mbtps2
Membrane-bound transcription factor peptidase, site 2.
      
 0.499
RPS27A
Ribosomal protein S27a.
    
   0.498
znf622
Zinc finger protein 622.
      
 0.493
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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