STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps37bVPS37B subunit of ESCRT-I. (282 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.994
mvb12a
Uncharacterized protein.
   
 0.992
LOC113027041
Zgc:123278.
    
 0.983
tsg101
Tumor susceptibility 101a.
    
 0.983
mvb12b
Multivesicular body subunit 12Ba.
   
 0.983
ENSACLP00000020055
Multivesicular body subunit 12Bb.
   
 0.983
vps25
Vacuolar protein sorting 25 homolog.
    
 0.939
vps37a
VPS37A subunit of ESCRT-I.
     
0.923
ENSACLP00000003123
UEV and lactate/malate dehyrogenase domains.
    
 0.908
LOC113024825
VPS37C subunit of ESCRT-I.
  
  
0.903
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.