STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcb9ATP-binding cassette, sub-family B (MDR/TAP), member 9. (799 aa)    
Predicted Functional Partners:
LOC113015179
Uncharacterized protein.
   
 0.814
ENSACLP00000029922
annotation not available
   
 0.814
LOC113015216
Proteasome subunit beta 9a.
   
 0.786
LOC113014291
Protein disulfide isomerase family A, member 8.
   
  0.773
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
0.689
ENSACLP00000033167
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.675
pdia3
Protein disulfide-isomerase.
   
 0.675
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.675
LOC113016206
Proteasome subunit beta.
 
 
 0.670
LOC113010181
Calreticulin.
   
 0.628
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.