Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vax1Ventral anterior homeobox 1. (322 aa)    
Predicted Functional Partners:
ENSACLP00000016856
Importin 13.
    
 
 0.690
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.628
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.569
ENSACLP00000003117
Fork-head domain-containing protein.
   
 0.562
ENSACLP00000026356
Forkhead box G1a.
   
 0.562
ENSACLP00000017156
WD repeat domain 90.
    
   0.559
LOC113035083
Paired box 2a.
    
 0.554
LOC113036815
Fork-head domain-containing protein.
   
 0.526
LOC113023510
MADS-box domain-containing protein.
    
 0.514
SRF
Serum response factor.
    
 0.514
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.