Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008135Vang-like protein. (542 aa)    
Predicted Functional Partners:
dvl2
Dishevelled segment polarity protein 2.
    
 0.961
dvl3
Dishevelled segment polarity protein 3a.
    
 0.961
rnpepl1
Arginyl aminopeptidase like 1.
    
 0.961
prickle2
Prickle homolog 2b.
    
 0.932
LOC113008915
Prickle homolog 1b.
    
 0.928
PRICKLE1
Prickle homolog 1a.
    
 0.924
VANGL1
Vang-like protein.
     
  0.872
ENSACLP00000003757
Vang-like protein.
     
  0.854
VANGL2
Vang-like protein.
     
  0.854
fhl3
Four and a half LIM domains 3a.
    
 0.676
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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