Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000008037Zgc:113436. (433 aa)    
Predicted Functional Partners:
ENSACLP00000002967
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.832
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
    
  0.832
ENSACLP00000014013
EF-hand calcium binding domain 2.
    
 
 0.768
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
    
   0.756
pgbd5
PiggyBac transposable element derived 5.
    
 
 0.736
HARBI1
Harbinger transposase derived 1.
      
 0.713
fancm
Uncharacterized protein.
    
  0.671
rag1
V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]
      
 0.665
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.657
naif1
Nuclear apoptosis inducing factor 1.
      
 0.655
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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