STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogfod22-oxoglutarate and iron-dependent oxygenase domain containing 2. (350 aa)    
Predicted Functional Partners:
LOC113028578
Uncharacterized protein.
   
 0.656
LOC113020579
Collagen beta(1-O)galactosyltransferase 1.
   
 0.656
colgalt2
Collagen beta(1-O)galactosyltransferase 2.
   
 0.656
ENSACLP00000033139
Cerebral endothelial cell adhesion molecule.
   
 0.656
ENSACLP00000036150
Uncharacterized protein.
   
 0.656
LOC113020799
Uncharacterized protein.
   
 0.656
LOC113015524
Uncharacterized protein.
    
  0.608
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.608
LOC113035753
Nuclear receptor binding SET domain protein 1a.
    
 0.566
nsd3
Nuclear receptor binding SET domain protein 3.
    
 0.566
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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