STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000008058BHLH domain-containing protein. (143 aa)    
Predicted Functional Partners:
TCF4
Transcription factor 4.
    
 0.718
LOC113010171
Transcription factor 3a.
    
 0.718
tcf12
Transcription factor 12.
    
 0.718
LOC113026641
BHLH domain-containing protein.
    
 0.718
LOC113016192
Transcription factor 3b.
    
 0.718
gdap2
Ganglioside induced differentiation associated protein 2.
      
 0.614
wdr3
WD repeat domain 3.
      
 0.614
LOC113034698
LIM domain binding 1a.
    
 0.523
ldb2
LIM domain binding 2a.
    
 0.523
LOC113023769
LIM-domain binding 1b.
    
 0.523
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.