close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bvesBlood vessel epicardial substance. (361 aa)    
Predicted Functional Partners:
ENSACLP00000013773
Tight junction protein 1b; Belongs to the MAGUK family.
     
 0.877
LOC113021929
Tight junction protein 1a; Belongs to the MAGUK family.
     
 0.877
ENSACLP00000027191
Uncharacterized protein.
     
 0.739
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
     
 0.739
ENSACLP00000007689
Uncharacterized protein.
     
 0.735
pms1
PMS1 homolog 1, mismatch repair system component.
      
 0.445
cep19
Centrosomal protein 19.
      
 0.426
ARHGEF25
Uncharacterized protein.
    
 
 0.413
LOC113022547
Rho guanine nucleotide exchange factor (GEF) 25b.
    
 
 0.413
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.