STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc72Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
ENSACLP00000036302
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.877
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.757
cfap74
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
    
   0.757
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.757
ENSACLP00000032869
Uncharacterized protein.
    
   0.757
ENSACLP00000033549
Uncharacterized protein.
    
   0.757
cfap221
Si:ch73-222h13.1.
    
   0.757
LOC113013952
Uncharacterized protein.
    
   0.725
ENSACLP00000001953
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
    
   0.725
ENSACLP00000003356
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.725
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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