Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113018716Capping protein (actin filament), gelsolin-like b. (344 aa)    
Predicted Functional Partners:
ENSACLP00000034439
Phosphoinositide kinase, FYVE finger containing.
     
  0.841
LOC113020065
Tropomodulin 2.
    
 
 0.793
LOC113008847
Uncharacterized protein.
    
 
 0.776
LOC113026240
WASP like actin nucleation promoting factor a.
    
 
 0.776
rbm18
RNA binding motif protein 18.
    
   0.760
LOC113010536
Scinderin like b.
     
  0.739
LOC113014197
Uncharacterized protein.
   
   0.739
SCIN
Scinderin.
     
  0.739
ENSACLP00000039452
Scinderin like a.
     
  0.739
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 
 0.737
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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