Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008784Ephrin RBD domain-containing protein; Belongs to the ephrin family. (241 aa)    
Predicted Functional Partners:
LOC113022294
Eph receptor A2 a.
   
 0.985
epha8
Uncharacterized protein.
   
 0.985
LOC113013151
Eph receptor A2 b.
   
 0.981
LOC113010022
Receptor protein-tyrosine kinase.
    
 0.933
LOC113029559
Receptor protein-tyrosine kinase.
    
 0.919
LOC113010478
Uncharacterized protein.
   
 0.917
epha4
Eph receptor A4, like.
   
 0.917
epha5
Uncharacterized protein.
   
 0.903
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.899
LOC113013517
Erb-b2 receptor tyrosine kinase 3b.
    
 0.894
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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