STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008784Ephrin RBD domain-containing protein; Belongs to the ephrin family. (241 aa)    
Predicted Functional Partners:
LOC113022294
Eph receptor A2 a.
   
 0.934
epha8
Uncharacterized protein.
   
 0.931
LOC113013151
Eph receptor A2 b.
   
 0.925
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.898
ENSACLP00000014054
Tyrosine-protein kinase receptor.
    
 0.888
LOC113022284
Macrophage stimulating 1 receptor a.
   
 0.883
mst1r
Macrophage stimulating 1 receptor b.
   
 0.883
ENSACLP00000037698
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.877
LOC113011234
Tyrosine-protein kinase receptor.
    
 0.866
LOC113026105
Tyrosine-protein kinase receptor.
    
 0.866
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.