Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113007481Immunoglobulin superfamily, member 3. (1056 aa)    
Predicted Functional Partners:
gdap2
Ganglioside induced differentiation associated protein 2.
      
 0.714
ENSACLP00000028018
Tetratricopeptide repeat domain 12.
    
 
 0.699
ankk1
Ankyrin repeat and kinase domain containing 1.
    
 0.679
ENSACLP00000027490
Uncharacterized protein.
      
 0.655
wdr3
WD repeat domain 3.
      
 0.606
pik3r5
Phosphoinositide-3-kinase, regulatory subunit 5.
      
 0.600
LOC113016358
BHLH domain-containing protein.
      
 0.598
LOC113007016
Uncharacterized protein.
      
 0.556
ENSACLP00000008518
Ig-like domain-containing protein.
    
 
 0.544
CXCL8-3
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
      
 0.539
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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