Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000008120RAS p21 protein activator (GTPase activating protein) 1a. (1063 aa)    
Predicted Functional Partners:
ENSACLP00000013202
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.989
dok1
Docking protein 1b.
    
 
 0.984
hras
HRas proto-oncogene, GTPase a.
   
 0.963
LOC113020994
Zgc:55558.
   
 0.959
KRAS
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.959
KRAS-2
KRAS proto-oncogene, GTPase.
   
 0.959
CSDE1
Cold shock domain containing E1, RNA-binding.
   
 0.949
mras
Muscle RAS oncogene homolog.
    
 0.939
arhgap5
Rho GTPase activating protein 5.
    
 0.938
LOC113030215
Rho GTPase activating protein 35b.
    
 0.938
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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