Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPNE8Copine 8. (564 aa)    
Predicted Functional Partners:
sergef
Secretion regulating guanine nucleotide exchange factor.
   
  
 0.663
ENSACLP00000004820
Upper zone of growth plate and cartilage matrix associated b.
      
 0.655
ENSACLP00000017462
Fin bud initiation factor b.
      
 0.655
ENSACLP00000005618
Usher syndrome 1C.
      
 0.637
rnaseh2b
Ribonuclease H2, subunit B.
   
 
 0.627
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.571
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.542
znf536
Zinc finger protein 536.
      
 0.508
ENSACLP00000007376
Uncharacterized protein.
      
 0.508
ano9
Anoctamin.
      
 0.497
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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