Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
meox2Mesenchyme homeobox 2a. (314 aa)    
Predicted Functional Partners:
ENSACLP00000036671
Mesenchyme homeobox 1.
   
   0.966
pax9
Paired box 9.
    
 
 0.904
fuca2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
    
   0.750
ENSACLP00000028147
Paired box 1a.
    
 
 0.729
babam2
BRISC and BRCA1 A complex member 2.
    
 
 0.647
tbx22
T-box transcription factor 22.
    
 
 0.645
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
      
 0.614
anapc5
Anaphase promoting complex subunit 5.
      
 0.613
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
      
 0.611
mkx
Mohawk homeobox a.
   
 0.608
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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