Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zcchc4Zinc finger, CCHC domain containing 4. (496 aa)    
Predicted Functional Partners:
anapc5
Anaphase promoting complex subunit 5.
   
 
  0.890
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 
  0.878
ENSACLP00000002506
Uncharacterized protein.
     
  0.854
ENSACLP00000007309
Anaphase promoting complex subunit 16.
     
  0.854
anapc13
Anaphase promoting complex subunit 13.
     
  0.854
cdc27
Cell division cycle 27.
     
  0.854
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
     
  0.854
ENSACLP00000027823
Anaphase promoting complex subunit 2; Belongs to the cullin family.
     
  0.854
ENSACLP00000037904
Anaphase promoting complex subunit 1.
     
  0.854
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
     
  0.854
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.