STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113011980Glycogenin 1a. (382 aa)    
Predicted Functional Partners:
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.984
ENSACLP00000031786
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.984
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
   
 0.970
ENSACLP00000017593
Polymerase (DNA directed), delta 2, regulatory subunit.
   
 0.931
ENSACLP00000010605
DNA polymerase.
    
 0.928
LOC113024731
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.877
ENSACLP00000039345
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.877
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
   
 0.867
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.856
LOC113015879
Glycogenin 2.
  
  
 
0.853
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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