STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020475Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
aadat
Aminoadipate aminotransferase.
     
  0.800
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
  0.800
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.667
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.630
mfsd3
Major facilitator superfamily domain containing 3.
      
 0.613
svopl
SVOP-like.
      
 0.609
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.605
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.604
ENSACLP00000020358
Major facilitator superfamily domain containing 6a.
      
 0.601
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.600
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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