Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACLP00000008196RNA binding motif protein 12B. (650 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
     
  0.768
aadat
Aminoadipate aminotransferase.
     
  0.768
wac
WW domain containing adaptor with coiled-coil a.
    
   0.744
LOC113010114
WW domain-containing protein.
    
   0.744
ddc
Dopa decarboxylase.
     
  0.650
ENSACLP00000028085
Histidine decarboxylase.
     
  0.650
asb12
Ankyrin repeat and SOCS box-containing 12b.
    
 
 0.622
ENSACLP00000019351
YLP motif containing 1.
   
  
 0.614
pwwp2b
PWWP domain containing 2B.
      
 0.608
ENSACLP00000009108
Adenosine kinase a.
    
   0.596
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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