Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH41593.1 | CUH44805.1 | RUM4293_00468 | RUM4293_03711 | Blue-light-activated protein. | Aerobic respiration control sensor protein ArcB. | 0.999 |
CUH41593.1 | barA_1 | RUM4293_00468 | RUM4293_01705 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
CUH41593.1 | barA_2 | RUM4293_00468 | RUM4293_03712 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
CUH41593.1 | dctD_1 | RUM4293_00468 | RUM4293_00226 | Blue-light-activated protein. | C4-dicarboxylate transport transcriptional regulatory protein DctD. | 0.543 |
CUH41593.1 | glnG | RUM4293_00468 | RUM4293_00603 | Blue-light-activated protein. | Nitrogen regulation protein NR(I). | 0.509 |
CUH41593.1 | glnL | RUM4293_00468 | RUM4293_00606 | Blue-light-activated protein. | Nitrogen regulation protein NR(II). | 0.958 |
CUH41593.1 | ntrC | RUM4293_00468 | RUM4293_00605 | Blue-light-activated protein. | Nitrogen assimilation regulatory protein. | 0.415 |
CUH41593.1 | pleC_1 | RUM4293_00468 | RUM4293_01704 | Blue-light-activated protein. | Non-motile and phage-resistance protein. | 0.999 |
CUH41593.1 | yycG_1 | RUM4293_00468 | RUM4293_00604 | Blue-light-activated protein. | Sensor histidine kinase YycG. | 0.791 |
CUH44805.1 | CUH41593.1 | RUM4293_03711 | RUM4293_00468 | Aerobic respiration control sensor protein ArcB. | Blue-light-activated protein. | 0.999 |
CUH44805.1 | barA_1 | RUM4293_03711 | RUM4293_01705 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
CUH44805.1 | barA_2 | RUM4293_03711 | RUM4293_03712 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
CUH44805.1 | dctD_1 | RUM4293_03711 | RUM4293_00226 | Aerobic respiration control sensor protein ArcB. | C4-dicarboxylate transport transcriptional regulatory protein DctD. | 0.979 |
CUH44805.1 | dctD_2 | RUM4293_03711 | RUM4293_00290 | Aerobic respiration control sensor protein ArcB. | C4-dicarboxylate transport transcriptional regulatory protein DctD. | 0.979 |
CUH44805.1 | glnG | RUM4293_03711 | RUM4293_00603 | Aerobic respiration control sensor protein ArcB. | Nitrogen regulation protein NR(I). | 0.979 |
CUH44805.1 | glnL | RUM4293_03711 | RUM4293_00606 | Aerobic respiration control sensor protein ArcB. | Nitrogen regulation protein NR(II). | 0.977 |
CUH44805.1 | ntrC | RUM4293_03711 | RUM4293_00605 | Aerobic respiration control sensor protein ArcB. | Nitrogen assimilation regulatory protein. | 0.979 |
CUH44805.1 | pleC_1 | RUM4293_03711 | RUM4293_01704 | Aerobic respiration control sensor protein ArcB. | Non-motile and phage-resistance protein. | 0.999 |
CUH44805.1 | yycG_1 | RUM4293_03711 | RUM4293_00604 | Aerobic respiration control sensor protein ArcB. | Sensor histidine kinase YycG. | 0.959 |
barA_1 | CUH41593.1 | RUM4293_01705 | RUM4293_00468 | Signal transduction histidine-protein kinase BarA. | Blue-light-activated protein. | 0.999 |
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