Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH41402.1 | CUH41826.1 | RUM4293_00273 | RUM4293_00708 | Indolepyruvate ferredoxin oxidoreductase. | Hypothetical protein. | 0.501 |
CUH41402.1 | CUH42021.1 | RUM4293_00273 | RUM4293_00906 | Indolepyruvate ferredoxin oxidoreductase. | Methylmalonyl-CoA carboxyltransferase 12S subunit. | 0.591 |
CUH41402.1 | CUH44402.1 | RUM4293_00273 | RUM4293_03303 | Indolepyruvate ferredoxin oxidoreductase. | Methylmalonyl-CoA carboxyltransferase 12S subunit. | 0.680 |
CUH41402.1 | accD5 | RUM4293_00273 | RUM4293_04704 | Indolepyruvate ferredoxin oxidoreductase. | Putative propionyl-CoA carboxylase beta chain 5. | 0.503 |
CUH41402.1 | lgrD | RUM4293_00273 | RUM4293_00010 | Indolepyruvate ferredoxin oxidoreductase. | Linear gramicidin synthase subunit D. | 0.538 |
CUH41402.1 | scpA_1 | RUM4293_00273 | RUM4293_02406 | Indolepyruvate ferredoxin oxidoreductase. | Methylmalonyl-CoA mutase. | 0.931 |
CUH41402.1 | scpA_3 | RUM4293_00273 | RUM4293_04713 | Indolepyruvate ferredoxin oxidoreductase. | Methylmalonyl-CoA mutase. | 0.931 |
CUH41826.1 | CUH41402.1 | RUM4293_00708 | RUM4293_00273 | Hypothetical protein. | Indolepyruvate ferredoxin oxidoreductase. | 0.501 |
CUH41826.1 | CUH42021.1 | RUM4293_00708 | RUM4293_00906 | Hypothetical protein. | Methylmalonyl-CoA carboxyltransferase 12S subunit. | 0.583 |
CUH41826.1 | CUH44402.1 | RUM4293_00708 | RUM4293_03303 | Hypothetical protein. | Methylmalonyl-CoA carboxyltransferase 12S subunit. | 0.583 |
CUH41826.1 | accD5 | RUM4293_00708 | RUM4293_04704 | Hypothetical protein. | Putative propionyl-CoA carboxylase beta chain 5. | 0.583 |
CUH41826.1 | hmgA | RUM4293_00708 | RUM4293_02202 | Hypothetical protein. | Homogentisate 1,2-dioxygenase. | 0.840 |
CUH41826.1 | kipI | RUM4293_00708 | RUM4293_00705 | Hypothetical protein. | Sporulation inhibitor KipI. | 0.464 |
CUH41826.1 | lgrD | RUM4293_00708 | RUM4293_00010 | Hypothetical protein. | Linear gramicidin synthase subunit D. | 0.618 |
CUH41826.1 | pxpA | RUM4293_00708 | RUM4293_00707 | Hypothetical protein. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.479 |
CUH41826.1 | scpA_1 | RUM4293_00708 | RUM4293_02406 | Hypothetical protein. | Methylmalonyl-CoA mutase. | 0.804 |
CUH41826.1 | scpA_3 | RUM4293_00708 | RUM4293_04713 | Hypothetical protein. | Methylmalonyl-CoA mutase. | 0.804 |
CUH42021.1 | CUH41402.1 | RUM4293_00906 | RUM4293_00273 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Indolepyruvate ferredoxin oxidoreductase. | 0.591 |
CUH42021.1 | CUH41826.1 | RUM4293_00906 | RUM4293_00708 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Hypothetical protein. | 0.583 |
CUH42021.1 | lgrD | RUM4293_00906 | RUM4293_00010 | Methylmalonyl-CoA carboxyltransferase 12S subunit. | Linear gramicidin synthase subunit D. | 0.847 |
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