Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH41841.1 | CUH41899.1 | RUM4293_00724 | RUM4293_00783 | Putative esterase. | Quinol dehydrogenase periplasmic component. | 0.674 |
CUH41841.1 | CUH45302.1 | RUM4293_00724 | RUM4293_04214 | Putative esterase. | Hopanoid-associated sugar epimerase. | 0.880 |
CUH41841.1 | lgrD | RUM4293_00724 | RUM4293_00010 | Putative esterase. | Linear gramicidin synthase subunit D. | 0.921 |
CUH41841.1 | nqo1_1 | RUM4293_00724 | RUM4293_02043 | Putative esterase. | NADH-quinone oxidoreductase subunit 1. | 0.992 |
CUH41841.1 | nqo1_2 | RUM4293_00724 | RUM4293_03318 | Putative esterase. | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.775 |
CUH41841.1 | nqo2 | RUM4293_00724 | RUM4293_03316 | Putative esterase. | NADH-quinone oxidoreductase chain 2. | 0.755 |
CUH41841.1 | nqo3 | RUM4293_00724 | RUM4293_03322 | Putative esterase. | NADH-quinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.912 |
CUH41841.1 | petA | RUM4293_00724 | RUM4293_01530 | Putative esterase. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.843 |
CUH41841.1 | petC | RUM4293_00724 | RUM4293_01528 | Putative esterase. | Cytochrome c1 precursor. | 0.849 |
CUH41841.1 | tycC_2 | RUM4293_00724 | RUM4293_00009 | Putative esterase. | Tyrocidine synthase III. | 0.662 |
CUH41899.1 | CUH41841.1 | RUM4293_00783 | RUM4293_00724 | Quinol dehydrogenase periplasmic component. | Putative esterase. | 0.674 |
CUH41899.1 | CUH45302.1 | RUM4293_00783 | RUM4293_04214 | Quinol dehydrogenase periplasmic component. | Hopanoid-associated sugar epimerase. | 0.988 |
CUH41899.1 | lgrD | RUM4293_00783 | RUM4293_00010 | Quinol dehydrogenase periplasmic component. | Linear gramicidin synthase subunit D. | 0.874 |
CUH41899.1 | nqo1_1 | RUM4293_00783 | RUM4293_02043 | Quinol dehydrogenase periplasmic component. | NADH-quinone oxidoreductase subunit 1. | 0.999 |
CUH41899.1 | nqo1_2 | RUM4293_00783 | RUM4293_03318 | Quinol dehydrogenase periplasmic component. | NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.992 |
CUH41899.1 | nqo2 | RUM4293_00783 | RUM4293_03316 | Quinol dehydrogenase periplasmic component. | NADH-quinone oxidoreductase chain 2. | 0.994 |
CUH41899.1 | nqo3 | RUM4293_00783 | RUM4293_03322 | Quinol dehydrogenase periplasmic component. | NADH-quinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.997 |
CUH41899.1 | petA | RUM4293_00783 | RUM4293_01530 | Quinol dehydrogenase periplasmic component. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.990 |
CUH41899.1 | petC | RUM4293_00783 | RUM4293_01528 | Quinol dehydrogenase periplasmic component. | Cytochrome c1 precursor. | 0.984 |
CUH41899.1 | tycC_2 | RUM4293_00783 | RUM4293_00009 | Quinol dehydrogenase periplasmic component. | Tyrocidine synthase III. | 0.884 |
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