Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH43791.1 | CUH43792.1 | RUM4293_02687 | RUM4293_02688 | Hypothetical protein. | Disulfide bond formation protein B. | 0.762 |
CUH43791.1 | glpR | RUM4293_02687 | RUM4293_02686 | Hypothetical protein. | Glycerol-3-phosphate regulon repressor. | 0.507 |
CUH43791.1 | oprM | RUM4293_02687 | RUM4293_02691 | Hypothetical protein. | Outer membrane protein OprM precursor. | 0.590 |
CUH43791.1 | yiaV_1 | RUM4293_02687 | RUM4293_02690 | Hypothetical protein. | Inner membrane protein YiaV precursor. | 0.594 |
CUH43791.1 | yiaW_2 | RUM4293_02687 | RUM4293_02689 | Hypothetical protein. | Inner membrane protein YiaW. | 0.649 |
CUH43792.1 | CUH43791.1 | RUM4293_02688 | RUM4293_02687 | Disulfide bond formation protein B. | Hypothetical protein. | 0.762 |
CUH43792.1 | glpR | RUM4293_02688 | RUM4293_02686 | Disulfide bond formation protein B. | Glycerol-3-phosphate regulon repressor. | 0.500 |
CUH43792.1 | oprM | RUM4293_02688 | RUM4293_02691 | Disulfide bond formation protein B. | Outer membrane protein OprM precursor. | 0.600 |
CUH43792.1 | yiaV_1 | RUM4293_02688 | RUM4293_02690 | Disulfide bond formation protein B. | Inner membrane protein YiaV precursor. | 0.602 |
CUH43792.1 | yiaW_2 | RUM4293_02688 | RUM4293_02689 | Disulfide bond formation protein B. | Inner membrane protein YiaW. | 0.658 |
glpR | CUH43791.1 | RUM4293_02686 | RUM4293_02687 | Glycerol-3-phosphate regulon repressor. | Hypothetical protein. | 0.507 |
glpR | CUH43792.1 | RUM4293_02686 | RUM4293_02688 | Glycerol-3-phosphate regulon repressor. | Disulfide bond formation protein B. | 0.500 |
glpR | oprM | RUM4293_02686 | RUM4293_02691 | Glycerol-3-phosphate regulon repressor. | Outer membrane protein OprM precursor. | 0.400 |
glpR | yiaV_1 | RUM4293_02686 | RUM4293_02690 | Glycerol-3-phosphate regulon repressor. | Inner membrane protein YiaV precursor. | 0.402 |
glpR | yiaW_2 | RUM4293_02686 | RUM4293_02689 | Glycerol-3-phosphate regulon repressor. | Inner membrane protein YiaW. | 0.434 |
oprM | CUH43791.1 | RUM4293_02691 | RUM4293_02687 | Outer membrane protein OprM precursor. | Hypothetical protein. | 0.590 |
oprM | CUH43792.1 | RUM4293_02691 | RUM4293_02688 | Outer membrane protein OprM precursor. | Disulfide bond formation protein B. | 0.600 |
oprM | glpR | RUM4293_02691 | RUM4293_02686 | Outer membrane protein OprM precursor. | Glycerol-3-phosphate regulon repressor. | 0.400 |
oprM | yiaV_1 | RUM4293_02691 | RUM4293_02690 | Outer membrane protein OprM precursor. | Inner membrane protein YiaV precursor. | 0.955 |
oprM | yiaW_2 | RUM4293_02691 | RUM4293_02689 | Outer membrane protein OprM precursor. | Inner membrane protein YiaW. | 0.711 |
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