Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH42434.1 | CUH44349.1 | RUM4293_01322 | RUM4293_03250 | Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein. | 0.466 |
CUH42434.1 | CUH44853.1 | RUM4293_01322 | RUM4293_03761 | Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein. | 0.491 |
CUH42434.1 | CUH45797.1 | RUM4293_01322 | RUM4293_04714 | Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein. | 0.432 |
CUH43256.1 | CUH44853.1 | RUM4293_02149 | RUM4293_03761 | Hypothetical protein. | Hypothetical protein. | 0.457 |
CUH43802.1 | CUH43976.1 | RUM4293_02698 | RUM4293_02873 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.479 |
CUH43802.1 | CUH44853.1 | RUM4293_02698 | RUM4293_03761 | TRAP-type C4-dicarboxylate transport system, small permease component. | Hypothetical protein. | 0.487 |
CUH43802.1 | dctP_3 | RUM4293_02698 | RUM4293_02699 | TRAP-type C4-dicarboxylate transport system, small permease component. | C4-dicarboxylate-binding periplasmic protein precursor. | 0.989 |
CUH43802.1 | siaT_12 | RUM4293_02698 | RUM4293_02872 | TRAP-type C4-dicarboxylate transport system, small permease component. | Neu5Ac permease. | 0.416 |
CUH43976.1 | CUH43802.1 | RUM4293_02873 | RUM4293_02698 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.479 |
CUH43976.1 | CUH44853.1 | RUM4293_02873 | RUM4293_03761 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | Hypothetical protein. | 0.770 |
CUH43976.1 | dctP_3 | RUM4293_02873 | RUM4293_02699 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | C4-dicarboxylate-binding periplasmic protein precursor. | 0.418 |
CUH43976.1 | pstS_2 | RUM4293_02873 | RUM4293_04095 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | Phosphate-binding protein PstS precursor. | 0.526 |
CUH43976.1 | siaT_12 | RUM4293_02873 | RUM4293_02872 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | Neu5Ac permease. | 0.994 |
CUH44349.1 | CUH42434.1 | RUM4293_03250 | RUM4293_01322 | Hypothetical protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.466 |
CUH44349.1 | CUH44853.1 | RUM4293_03250 | RUM4293_03761 | Hypothetical protein. | Hypothetical protein. | 0.425 |
CUH44853.1 | CUH42434.1 | RUM4293_03761 | RUM4293_01322 | Hypothetical protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.491 |
CUH44853.1 | CUH43256.1 | RUM4293_03761 | RUM4293_02149 | Hypothetical protein. | Hypothetical protein. | 0.457 |
CUH44853.1 | CUH43802.1 | RUM4293_03761 | RUM4293_02698 | Hypothetical protein. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.487 |
CUH44853.1 | CUH43976.1 | RUM4293_03761 | RUM4293_02873 | Hypothetical protein. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.770 |
CUH44853.1 | CUH44349.1 | RUM4293_03761 | RUM4293_03250 | Hypothetical protein. | Hypothetical protein. | 0.425 |
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