STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH44936.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
CUH44937.1
Hypothetical protein.
 
     0.946
CUH44457.1
Hypothetical protein.
 
     0.772
dpnA_1
Modification methylase DpnIIB.
  
     0.763
CUH41201.1
Hypothetical protein.
  
     0.762
dpnA_3
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.762
CUH41172.1
Hypothetical protein.
  
     0.760
CUH44460.1
Hypothetical protein.
  
     0.760
CUH43742.1
Hypothetical protein.
 
     0.756
CUH44455.1
Hypothetical protein.
 
     0.756
rsrIM
Putative methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.736
Your Current Organism:
Ruegeria atlantica
NCBI taxonomy Id: 81569
Other names: ATCC 700000, Agrobacterium atlanticum, Agrobacterium meteori, CECT 4292, CIP 105975, DSM 5823, IAM 14463, IFO 15792, JCM 21234, NBRC 15792, R. atlantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.